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Immunoglobulin domain
Structure of an antigen binding fragment of an antibody.
Identifiers
Symbolig
Pfam PF00047
Pfam clan CL0159
InterPro IPR013151
PROSITE PDOC00262
SCOP2 8fab / SCOPe / SUPFAM
OPM superfamily 193
OPM protein 5f71
CDD cd00096
Membranome 2
Available protein structures:
Pfam   structures / ECOD  
PDB RCSB PDB; PDBe; PDBj
PDBsum structure summary

The immunoglobulin domain, also known as the immunoglobulin fold, is a type of protein domain that consists of a 2-layer sandwich of 7-9 antiparallel β-strands arranged in two β-sheets with a Greek key topology, [1] [2] consisting of about 125 amino acids.

The backbone switches repeatedly between the two β-sheets. Typically, the pattern is (N-terminal β-hairpin in sheet 1)-(β-hairpin in sheet 2)-(β-strand in sheet 1)-(C-terminal β-hairpin in sheet 2). The cross-overs between sheets form an "X", so that the N- and C-terminal hairpins are facing each other.

Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin, and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein–protein and protein– ligand interactions. [3]

Examples

Human genes encoding proteins containing the immunoglobulin domain include:

See also

References

  1. ^ Bork P, Holm L, Sander C (September 1994). "The immunoglobulin fold. Structural classification, sequence patterns and common core". J. Mol. Biol. 242 (4): 309–20. doi: 10.1006/jmbi.1994.1582. PMID  7932691.
  2. ^ Brümmendorf T, Rathjen FG (1995). "Cell adhesion molecules 1: immunoglobulin superfamily". Protein Profile. 2 (9): 963–1108. PMID  8574878.
  3. ^ Williams AF, Barclay AN (1988). "The immunoglobulin superfamily—domains for cell surface recognition". Annu. Rev. Immunol. 6: 381–405. doi: 10.1146/annurev.iy.06.040188.002121. PMID  3289571.

External links

This article incorporates text from the public domain Pfam and InterPro: IPR013151