Software for COVID-19 pandemic mitigation takes many forms. It includes
mobile apps for contact tracing and
notifications about infection risks,
vaccine passports, software for enabling – or improving the effectiveness of –
lockdowns and
social distancing, Web software for the creation of related information services, and research and development software. A common issue is that few apps interoperate, reducing their effectiveness.
Numerous tracing applications have been developed or proposed, with official government support in some territories and jurisdictions. Several frameworks for building contact-tracing apps have been developed. Privacy concerns have been raised, especially about systems that are based on tracking the geographical location of app users.
Less overtly intrusive alternatives include the co-option of
Bluetooth signals to log a user's proximity to other cellphones. (Bluetooth technology has form in tracking cell-phones' locations.)
On 10 April 2020,
Google and
Apple jointly announced that they would integrate functionality to support such Bluetooth-based apps directly into their
Android and
iOSoperating systems. India's COVID-19 tracking app Aarogya Setu became the world's fastest growing application - beating
Pokémon Go - with 50 million users in the first 13 days of its release. (Full article...)
Design
Design decisions relate to issues such as privacy, data-storage and security. Apps are generally not interoperable.[1][2]
Use
Voluntary use by the public was ineffective.[3][4][5] A lack of features and bugs further reduced usefulness.[6]
Some apps include "check-ins" that enable exposure notifications when entering public venues such as fitness centres.[7] One such example is the We-Care project that used anonymity and crowdsourced information about which check-ins are essential, to alert exposed users.[8][9][10]
Digital vaccine passports and vaccination certificates use software for verifying vaccination status.[4]
Such certificates were used to regulate access to events, buildings and services such as airplanes, concert venues and
health clubs[4] and travel across borders.[11]
Hurdles
Given the uneven distribution of vaccines across jurisdictions, granting privileges based on vaccination status certification means that those with easier vaccine access have unfair access to those privileges.[12] If vaccination status is only verifiable using digital technology, those without that technology may also lose access even if they are vaccinated. Such privileging mechanisms may exacerbate inequality,[13] increase risks of deliberate infections or transmission,[11][14] Public health justifications for restricting behavior based on vaccine status have become less frequent over the course of the pandemic as vaccines do not stop transmission.
Design
Some teams are developing interoperable solutions, but this is not common.[4][15] Governments express concerns over
data sovereignty.[16]
WHO established a "working group focused on establishing standards for a common architecture for a digital smart vaccination certificate to support vaccine(s) against COVID-19 and other immunizations".[13][17]
Laurin Weissinger argued that it is important for such software to be fully
free and open source, to clarify concepts and designs, to have it tested by security experts and to describe data that is collected and how it is used to build trust.[20] Jenny Wanger contended that it is essential for such software to be open source.[21] Jay Stanley affirmed this notion and warned that an "architecture that is not good for transparency, privacy, or user control" could set a "bad standard" for future credentialing systems.[22]
It has been suggested that this section be
split out into another article. (
Discuss) (June 2021)
The Wikimedia project Scholia provides a
graphical interface around data in
Wikidata – such as literature about a specific coronavirus protein – to help with research, research-analysis, data interoperability, applications, updates, and data-mining.[25][26]
A group of online archivists used
open access PHP- and Linux-based
shadow librarySci-Hub to create an archive of over 5000 articles about
coronaviruses. Making the archive openly accessible is currently illegal.[27] Sci-Hub provides free full access for most scientific pandemic publications.[citation needed]
Physician and open access advocate Josh Farkas has added a chapter on COVID-19 treatment to his e-book on
intensive care medicine, hosted by
EMCrit.[33]
Medical software
This section needs expansion with: Content regarding apps for citizen science from its respective article, and the article on the pandemic's impacts on STEM, particularly bulleted lists. You can help by
adding to it. (September 2021)
GNU Health
The open source, Qt-[34][35] and GTK-based
GNU Health offer a variety of default features for use during pandemics.[24] It allows parties to pool efforts on a single, integrated program – instead of individual, programs for specific purposes. Existing features include a way for making clinical information available and update it in any health institution via a globally unique "Person Universal ID". It includes lab test templates and functionalities, digital signing and encryption.[36]
Software helps manage vaccine distribution, including verifying the
cold chain, and to record vaccination events.[37]
Screening
In China, Web-technologies were used to direct individuals to appropriate resources. Infrared thermal cameras are used to detect individuals with fever.[38] Machine learning has been used for diagnosis and risk prediction.[38]
Quarantining
Electronic monitoring has been used to manage quarantine adherence.Furthermore, various software designs may threaten civil liberties and infringe on privacy.[38] China informs individuals about whether and how long they must quarantine via a phone app and informs authorities about their compliance.[39]
Genomic data
Nextstrain is an open source platform for pathogen genomic data such as about
viral evolution and was used for research about novel
variants.
Vaccine production
Software has been used in
leaks and industrial espionage of vaccine-related data.[40]Machine learning has been applied to improve vaccine manufacturing productivity.[41]
That month
Rosetta@home joined the effort. Researchers announced that Rosetta@home allowed them to "accurately predict the atomic-scale structure of an important coronavirus protein weeks before it could be measured in the lab."[49]
In May 2020, the OpenPandemics—COVID-19 partnership was launched between
Scripps Research and IBM's
World Community Grid. The partnership is a distributed computing project that "will automatically run a simulated experiment in the background [of connected home PCs] that will help predict the efficacy of a particular chemical compound as a potential treatment for
COVID-19."[50]
Drug repurposing research and drug development
This section needs expansion. You can help by
adding to it. (June 2021)
Supercomputers – including Summit and
Fugaku – have been used to explore potential treatments by running simulations with data on already-approved medications.[51][52][53][42][44] Two early examples of supercomputer consortia are:
The C3.ai Digital Transformation Institute, an additional consortium of Microsoft, six universities (including MIT), and the
National Center for Supercomputer Applications in Illinois, working under the auspices of artificial intelligence software company C3.ai pooled supercomputer resources toward drug discovery, medical protocol development and public health strategy improvement, as well as awarding grants for similar purposes.[57][58]