From Wikipedia, the free encyclopedia
Family of bacteria
The Nakamurella is a genus of
bacteria.
[1]
Phylogeny
The currently accepted taxonomy is based on the
List of Prokaryotic names with Standing in Nomenclature (LPSN)
[2] and
National Center for Biotechnology Information (NCBI)
[4]
16S rRNA based
LTP_08_2023
[5]
[6]
[7]
|
120 marker proteins based
GTDB 08-RS214
[8]
[9]
[10]
|
Nakamurella
|
|
N. endophytica Tuo et al. 2016
|
|
|
|
|
N. intestinalis Kim et al. 2017
|
|
|
|
N. silvestris França et al. 2016
|
|
|
|
N. antarctica Da et al. 2019
|
|
|
N. deserti Liu et al. 2019
|
|
|
|
|
|
|
|
|
|
N. multipartita (Yoshimi et al. 1996) Tao et al. 2004
|
|
|
|
N. panacisegetis Kim et al. 2012
|
|
|
|
N. flava Yan et al. 2020
|
|
|
|
N. leprariae An et al. 2022
|
|
|
|
N. flavida (Yoon et al. 2007) Kim et al. 2012
|
|
|
|
N. aerolata Chaudhary et al. 2021
|
|
|
N. lactea (Lee et al. 2008) Kim et al. 2012
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Nakamurella
|
|
|
|
|
|
|
|
|
|
|
N. endophytica
|
|
|
N. panacisegetis
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Species incertae sedis:
- N. alba corrig. Jiang et al. 2023
See also
References
- ^
a
b
c Tao TS, Yue YY, Chen WX, Chen WF (2004).
"Proposal of Nakamurella gen. nov. as a substitute for the bacterial genus Microsphaera Yoshimi et al. 1996 and Nakamurellaceae fam. nov. as a substitute for the illegitimate bacterial family Microsphaeraceae Rainey et al. 1997". Int J Syst Evol Microbiol. 54 (Pt 3): 999–1000.
doi:
10.1099/ijs.0.02933-0.
PMID
15143055.
- ^
a
b A.C. Parte; et al.
"Nakamurella".
List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
-
^ Sen A, Daubin V, Abrouk D, Gifford I, Berry AM, Normand P (2014).
"Phylogeny of the class Actinobacteria revisited in the light of complete genomes. The orders "Frankiales" and Micrococcales should be split into coherent entities: Proposal of Frankiales ord. nov., Geodermatophilales ord. nov., Acidothermales ord. nov. and Nakamurellales ord. nov". Int J Syst Evol Microbiol. 64 (Pt 11): 3821–3832.
doi:
10.1099/ijs.0.063966-0.
PMID
25168610.
-
^ Sayers; et al.
"Nakamurella".
National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
-
^
"The LTP". Retrieved 20 November 2023.
-
^
"LTP_all tree in newick format". Retrieved 20 November 2023.
-
^
"LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
-
^
"GTDB release 08-RS214".
Genome Taxonomy Database. Retrieved 10 May 2023.
-
^
"bac120_r214.sp_label".
Genome Taxonomy Database. Retrieved 10 May 2023.
-
^
"Taxon History".
Genome Taxonomy Database. Retrieved 10 May 2023.
|
---|
|
Terrabacteria
BV1, BV3, BV5 | others | |
---|
Cyanoprokaryota |
- Cyanobacteriota
- "
Margulisiibacteriota"
- "Marinamargulisbacteria"
- "Riflemargulisbacteria"
- "Saganbacteria"
- "Termititenacia"
|
---|
Firmicutes
BV3 Low GC |
-
Bacillota
- Bacillota A
- "
Clostridiia"
- "Thermoanaerobacteria"
- "Thermosediminibacteria"
- Bacillota D
- Bacillota E
- "Sulfobacillia"
- "Symbiobacteriia"
- "Thermaerobacteria"
- Bacillota G
- "Hydrogenisporia"
- Limnochordia
- "
Desulfotomaculota"
- "Carboxydocellia"
- "Carboxydothermia"
- "Dehalobacteriia"
- "Desulfitobacteriia"
- "Desulfotomaculia"
- "Moorellia"
- "Peptococcia"
- "Syntrophomonadia"
- "Thermincolia"
- "Halanaerobiaeota"
- "Selenobacteria"
|
---|
|
---|
CPR group | |
---|
Thermotogida | |
---|
Fusobacterida | |
---|
Hydrobacteria
BV2, BV4 | |
---|
others | |
---|
|