From Wikipedia, the free encyclopedia
Phylum of bacteria
Nitrospirota is a phylum of bacteria. It includes multiple genera, such as
Nitrospira , the largest. The first member of this phylum,
Nitrospira marina , was discovered in 1985.
[2] The second member,
Nitrospira moscoviensis , was discovered in 1995.
[3]
[4]
Nitrospirota contains
nitrifying taxa which oxidize nitrite to nitrate (nitrite-oxidizing bacteria, NOB
[5] ) and
commamox bacteria
Nitrospira inopinata discovered in 2015
[6]
[7] and cultivated in 2017.
[8]
Phylogeny
16S rRNA based
LTP _08_2023
[9]
[10]
[11]
120 single copy marker proteins based
GTDB 08-RS214
[12]
[13]
[14]
Nitrospirota
"Leptospirillia"
"Leptospirillales"
Thermodesulfovibrionia
Thermodesulfovibrionales
"Leptospirillaeota"
"Leptospirillales"
"Leptospirillaceae"
"Leptospirillia"
Nitrospirota
"Thermodesulfovibrionia"
"Thermodesulfovibrionales"
"
Nitrospiria "
Taxonomy
The currently accepted taxonomy is based on the
List of Prokaryotic names with Standing in Nomenclature (LSPN)
[15] and the
National Center for Biotechnology Information (NCBI).
[4]
Phylum "Nitrospirota " Garrity & Holt 2021
See also
References
^ Oren A, Garrity GM (2021).
"Valid publication of the names of forty-two phyla of prokaryotes" . Int J Syst Evol Microbiol . 71 (10): 5056.
doi :
10.1099/ijsem.0.005056 .
PMID
34694987 .
^ Watson SW, Bock E, Valois FW, Waterbury JB, Schlosser U (1986). "Nitrospira marina gen. nov. sp. nov.: a chemolithotrophic nitrite-oxidizing bacterium". Arch Microbiol . 144 (1): 1–7.
doi :
10.1007/BF00454947 .
S2CID
29796511 .
^ Ehrich S, Behrens D, Lebedeva E, Ludwig W, Bock E (July 1995). "A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship". Archives of Microbiology . 164 (1): 16–23.
doi :
10.1007/BF02568729 .
PMID
7646315 .
S2CID
2702110 .
^
a
b Sayers.
"Nitrospirae" .
National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20 .
^ Daims H, Nielsen JL, Nielsen PH, Schleifer KH, Wagner M (November 2001).
"In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plants" . Applied and Environmental Microbiology . 67 (11): 5273–84.
Bibcode :
2001ApEnM..67.5273D .
doi :
10.1128/AEM.67.11.5273-5284.2001 .
PMC
93301 .
PMID
11679356 .
^ Daims H, Lebedeva EV, Pjevac P, Han P, Herbold C, Albertsen M, et al. (December 2015).
"Complete nitrification by Nitrospira bacteria" . Nature . 528 (7583): 504–9.
Bibcode :
2015Natur.528..504D .
doi :
10.1038/nature16461 .
PMC
5152751 .
PMID
26610024 .
^ van Kessel MA, Speth DR, Albertsen M, Nielsen PH, Op den Camp HJ, Kartal B, et al. (December 2015).
"Complete nitrification by a single microorganism" . Nature . 528 (7583): 555–9.
Bibcode :
2015Natur.528..555V .
doi :
10.1038/nature16459 .
PMC
4878690 .
PMID
26610025 .
^ Kits KD, Sedlacek CJ, Lebedeva EV, Han P, Bulaev A, Pjevac P, et al. (September 2017).
"Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle" . Nature . 549 (7671): 269–272.
Bibcode :
2017Natur.549..269K .
doi :
10.1038/nature23679 .
PMC
5600814 .
PMID
28847001 .
^
"The LTP" . Retrieved 20 November 2023 .
^
"LTP_all tree in newick format" . Retrieved 20 November 2023 .
^
"LTP_08_2023 Release Notes" (PDF) . Retrieved 20 November 2023 .
^
"GTDB release 08-RS214" .
Genome Taxonomy Database . Retrieved 10 May 2023 .
^
"bac120_r214.sp_label" .
Genome Taxonomy Database . Retrieved 10 May 2023 .
^
"Taxon History" .
Genome Taxonomy Database . Retrieved 10 May 2023 .
^ Euzéby JP.
" "Nitrospirae" " .
List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2016-03-20 .
Further reading
External links
Terrabacteria
BV1, BV3, BV5
others Cyanoprokaryota
Cyanobacteriota
"
Margulisiibacteriota "
"Marinamargulisbacteria"
"Riflemargulisbacteria"
"Saganbacteria"
"Termititenacia"
Firmicutes
BV3 Low GC
Bacillota
Bacillota A
"
Clostridiia "
"Thermoanaerobacteria"
"Thermosediminibacteria"
Bacillota D
Bacillota E
"Sulfobacillia"
"Symbiobacteriia"
"Thermaerobacteria"
Bacillota G
"Hydrogenisporia"
Limnochordia
"
Desulfotomaculota "
"Carboxydocellia"
"Carboxydothermia"
"Dehalobacteriia"
"Desulfitobacteriia"
"Desulfotomaculia"
"Moorellia"
"Peptococcia"
"Syntrophomonadia"
"Thermincolia"
"Halanaerobiaeota"
"Selenobacteria"
CPR group Thermotogida
Fusobacterida
Hydrobacteria
BV2, BV4
others
Extant
life phyla/divisions by domain