From Wikipedia, the free encyclopedia
Protein found in humans
Collagen alpha-1 (XXVII) chain (COL27A1) is a
protein that in humans is encoded by the COL27A1
gene .
[5]
COL27A1 is a type XXVII
collagen . It was discovered by
James Pace .
[6] This gene appears to be turned on in
cartilage , the eye, and in the ear.
Type XXVII collagen is related to the "fibrillar" class of collagens and may play a role in development of the skeleton.
Fibrillar collagens, such as COL27A1, compose one of the most ancient families of extracellular matrix molecules. They form major structural elements in extracellular matrices of cartilage, skin, and tendon.
[5]
[7]
Location
COL27A1 is located on
chromosome 9 in
homo sapiens specifically on spot number 32.
[8]
References
^
a
b
c
GRCh38: Ensembl release 89: ENSG00000196739 –
Ensembl , May 2017
^
a
b
c
GRCm38: Ensembl release 89: ENSMUSG00000045672 –
Ensembl , May 2017
^
"Human PubMed Reference:" . National Center for Biotechnology Information, U.S. National Library of Medicine .
^
"Mouse PubMed Reference:" . National Center for Biotechnology Information, U.S. National Library of Medicine .
^
a
b
"Entrez Gene: collagen" .
^ Pace JM, Corrado M, Missero C, Byers PH (March 2003). "Identification, characterization and expression analysis of a new fibrillar collagen gene, COL27A1". Matrix Biol . 22 (1): 3–14.
doi :
10.1016/S0945-053X(03)00007-6 .
PMID
12714037 .
^ Boot-Handford RP, Tuckwell DS, Plumb DA, Rock CF, Poulsom R (August 2003).
"A novel and highly conserved collagen (pro(alpha)1(XXVII)) with a unique expression pattern and unusual molecular characteristics establishes a new clade within the vertebrate fibrillar collagen family" . J. Biol. Chem . 278 (33): 31067–77.
doi :
10.1074/jbc.M212889200 .
PMID
12766169 .
^
"COL27A1 gene - Genetics Home Reference" . ghr.nlm.nih.gov . Archived from
the original on 2017-02-07.
Further reading
Gudbjartsson DF, Walters GB, Thorleifsson G, et al. (2008). "Many sequence variants affecting diversity of adult human height". Nat. Genet . 40 (5): 609–15.
doi :
10.1038/ng.122 .
PMID
18391951 .
S2CID
3005450 .
Rose JE, Behm FM, Drgon T, et al. (2010).
"Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score" . Mol. Med . 16 (7–8): 247–53.
doi :
10.2119/molmed.2009.00159 .
PMC
2896464 .
PMID
20379614 .
Ota T, Suzuki Y, Nishikawa T, et al. (2004).
"Complete sequencing and characterization of 21,243 full-length human cDNAs" . Nat. Genet . 36 (1): 40–5.
doi :
10.1038/ng1285 .
PMID
14702039 .
Nagase T, Nakayama M, Nakajima D, et al. (2001).
"Prediction of the coding sequences of unidentified human genes. XX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro" . DNA Res . 8 (2): 85–95.
doi :
10.1093/dnares/8.2.85 .
PMID
11347906 .
Jenkins E, Moss JB, Pace JM, Bridgewater LC (2005).
"The new collagen gene COL27A1 contains SOX9-responsive enhancer elements" . Matrix Biol . 24 (3): 177–84.
doi :
10.1016/j.matbio.2005.02.004 .
PMC
3205994 .
PMID
15922909 .
Strausberg RL, Feingold EA, Grouse LH, et al. (2002).
"Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences" . Proc. Natl. Acad. Sci. U.S.A . 99 (26): 16899–903.
Bibcode :
2002PNAS...9916899M .
doi :
10.1073/pnas.242603899 .
PMC
139241 .
PMID
12477932 .
Vieira AR, McHenry TG, Daack-Hirsch S, et al. (2008).
"Candidate gene/loci studies in cleft lip/palate and dental anomalies finds novel susceptibility genes for clefts" . Genet. Med . 10 (9): 668–74.
doi :
10.1097/GIM.0b013e3181833793 .
PMC
2734954 .
PMID
18978678 .
This article incorporates text from the
United States National Library of Medicine , which is in the
public domain .