This list of botanical gardens in Japan is intended to include all significant botanical gardens and arboretums in Japan.

• Akatsuka Botanical Garden ( Itabashi, Tokyo)
• Aloha Garden Tateyama ( Tateyama, Chiba)
• Amami Islands Botanical Garden ( Amami, Kagoshima)
• Aoshima Subtropical Botanical Garden ( Miyazaki, Miyazaki)
• Aritaki Arboretum ( Koshigaya, Saitama)
• Atagawa Tropical & Alligator Garden ( Kamo, Shizuoka)

• Botanic Garden, Faculty of Science, Kanazawa University ( Kanazawa, Ishikawa)
• Botanical Garden of Tohoku University ( Sendai, Miyagi)
• Botanic Gardens of Toyama ( Toyama, Toyama)
• Botanical Gardens Faculty of Science Osaka City University ( Katano, Osaka)

• Enoshima Tropical Plants Garden ( Fujisawa, Kanagawa)
• Experimental Station for Landscape Plants ( Chiba, Chiba)

• Fuji Bamboo Garden ( Nagaizumi, Shizuoka)
• Fukuoka Municipal Zoo and Botanical Garden ( Fukuoka, Fukuoka)
• Futagami Manyo Botanical Gardens ( Takaoka, Toyama)

• Hakone Botanical Garden of Wetlands ( Hakone, Kanagawa)
• Handayama Botanical Garden ( Okayama, Okayama)
• Hattori Ryokuchi Arboretum ( Toyonaka, Osaka)
• Higashiyama Zoo and Botanical Gardens ( Nagoya, Aichi)
• Himeji City Tegarayama Botanical Garden ( Himeji, Hyōgo)
• Himi Seaside Botanical Garden ( Himi, Toyama)
• Hiroshima Botanical Garden ( Hiroshima, Hiroshima)
• Hirugano Botanical Garden ( Gujō, Gifu)
• Hokkaido University Botanical Gardens ( Sapporo, Hokkaidō)

• Ibaraki Botanical Garden ( Naka, Ibaraki)
• Ibusuki Experimental Botanical Garden ( Ibusuki, Kagoshima)
• Ishikawa Forest Experiment Station ( Hakusan, Ishikawa)
• Itabashi Botanical Garden ( Itabashi, Tokyo)

• Jindai Botanical Garden ( Chōfu, Tokyo)

• Kagoshima Botanical Garden ( Kagoshima, Kagoshima)
• Kanagawa Prefectural Ofuna Botanical Garden ( Kamakura, Kanagawa)
• Kawaguchi Green Center ( Kawaguchi, Saitama)
• Kiseki No Hoshi Greenhouse ( Awaji, Hyōgo)
• Kitayama Botanical Garden ( Nishinomiya, Hyōgo)
• Kobe Municipal Arboretum ( Kōbe, Hyōgo)
• Koishikawa Botanical Gardens ( Bunkyō, Tokyo)
• Kosobe Conservatory ( Takatsuki, Osaka)
• Kubota Palm Garden ( Masaki, Ehime)
• Kyoto Botanical Garden ( Kyoto, Kyoto)

• Makino Botanical Garden ( Kōchi, Kōchi)
• Manyo Botanical Garden, Nara ( Nara, Nara)
• Michinoku Mano-Manyo Botanical Garden ( Kashima, Fukushima)
• Mito Municipal Botanical Park ( Mito, Ibaraki)
• Miyajima Natural Botanical Garden ( Hatsukaichi, Hiroshima)
• Miyakojima City Tropical Plant Garden ( Miyakojima, Okinawa)
• Mizunomori Water Botanical Garden ( Kusatsu, Shiga)

• Nagai Botanical Garden ( Osaka, Osaka)
• Nagasaki Subtropical Botanical Garden ( Nagasaki, Nagasaki)
• Niigata Prefectural Botanical Garden ( Niigata, Niigata)
• Nikko Botanical Garden ( Nikkō, Tochigi)
• Nunobiki Herb Garden ( Kōbe, Hyōgo)

• Omoro Botanical Garden ( Motobu, Okinawa)

• Rokkō Alpine Botanical Garden ( Kōbe, Hyōgo)

• Sakuya Konohana Kan ( Osaka, Osaka)
• Samuel Cocking Garden ( Enoshima)
• Sasebo Zoological Park and Botanical Garden ( Sasebo, Nagasaki)
• Seinan Gakuin University Biblical Botanical Garden ( Fukuoka, Fukuoka)
• Shimokamo Tropical Botanical Gardens ( Kamo, Shizuoka)
• Shimizu_Park ( Noda, Chiba)
• Southeast Botanical Gardens ( Okinawa, Okinawa)
• Suigō Sawara Aquatic Botanical Garden ( Katori, Chiba)
• Suma Rikyu Park ( Kōbe, Hyōgo)

• Tajima Plateau Botanical Gardens ( Kami, Hyōgo)
• Tama Forest Science Garden ( Hachiōji, Tokyo)
• Tennōji Botanical Garden ( Osaka, Osaka)

• Tokyo University of Agriculture Botanical Garden ( Atsugi, Kanagawa)
• Tropical & Subtropical Arboretum ( Kunigami, Okinawa)
• Tsukuba Botanical Garden ( Tsukuba, Ibaraki)

• Wakayama Prefecture Botanical Park ( Iwade, Wakayama)
• Yamashina Botanical Research Institute ( Kyoto, Kyoto)
• Yokohama Municipal Children's Botanical Garden ( Yokohama, Kanagawa)
• Yumenoshima Tropical Greenhouse Dome ( Kōtō, Tokyo)

External links

• BGBI Garden Search for Japan
• Jardins Botaniques Japonais (French)

See also

• List of botanical gardens