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Perkinsea
Double infection of two late Dinovorax pyriformis trophonts in a Prorocentrum micans cell. Scale bar: 10 μm.
Scientific classification Edit this classification
Domain: Eukaryota
Clade: Diaphoretickes
Clade: SAR
Clade: Alveolata
Phylum: Myzozoa
Subphylum: Dinozoa
Infraphylum: Perkinsozoa
Norén & Moestrup 1999 [2]
Class: Perkinsea
Levine 1978 [1]
Families
Synonyms
  • Perkinsasida
  • Perkinsorida
  • Perkinsemorphina

Perkinsids are single-celled protists that live as intracellular parasites of a variety of other organisms. They are classified as the class Perkinsea within the monotypic phylum Perkinsozoa. It is part of the eukaryotic supergroup Alveolata, along with dinoflagellates, their closest relatives, and another parasitic group known as Apicomplexa. Perkinsids are found in aquatic environments, as parasites of dinoflagellates and various animals.

Description

All known Perkinsozoa are intracellular parasites of a range of organisms, particularly microalgae and animals. [3] Species of Parviluciferaceae, Pararosariidae and Maranthos are parasites of dinoflagellates. [4] [5] Rastrimonas parasitize cryptophyte algae. [5] Xcellidae, Perkinsidae and Acrocoelus are parasites of various animals: fish, [6] bivalve molluscs [7] and acorn worms, respectively. [8] Perkinsozoa are found in aquatic environments, both marine [2] and freshwater. [9]

Systematics

Taxonomic history

Perkinsids were first described by Norman D. Levine in 1978, as the class Perkinsea within Alveolata. Levine only included one genus, Perkinsus, described in the same publication. [1] Later, the same author treated this group as class Perkinsasida within the phylum Apicomplexa, suggesting that Perkinsus is the most primitive apicomplexan. [10] However, this placement was controversial, and was later disproven by phylogenetic analyses that proved more evolutionary proximity to dinoflagellates than to apicomplexans. [11]

In 1999, with the discovery of Parvilucifera, biologists Fredrik Norén and Øjvind Moestrup separated the class Perkinsea into a new phylum Perkinsozoa, within the Alveolata, to accommodate these two genera. [2] In 2002 a third genus was described, Cryptophagus (now renamed Rastrimonas), but it was never genetically sequenced, which makes its phylogenetic position uncertain. [12]

In 2014 a new class was added to the phylum, known as Squirmidea. [13] However, phylogenetic analyses later demonstrated that squirmids are more closely related to the clade uniting Apicomplexa and Colpodellida than to dinoflagellates and perkinsids, and its status as a class of Perkinsozoa was rejected, making Perkinsea the only remaining class. [14] [15]

Phylogeny

Colponemids

Simplified cladogram of Alveolata based on 2023 phylogenomic analyses. [14] [15]

Perkinsids are a monophyletic group (or clade) of Alveolata, a large group of ecologically diverse protists such as dinoflagellates, ciliates, apicomplexans and chrompodellids, all characterized by the presence of cortical alveoli below their cell membrane. In particular, perkinsids are the sister group of dinoflagellates, together forming a clade known as Dinozoa. [16] Both groups, along with apicomplexans and their closest relatives, compose a clade known as Myzozoa. [14] [15]

Classification

As of 2023, the order-level classification of perkinsids remains ambiguous, and orders are very sparsely used. The families Pararosariidae and Parviluciferaceae have no assigned parent order, [4] [5] although one author, Thomas Cavalier-Smith, previously placed Parvilucifera within the order Rastrimonadida, along with Rastrimonas. [17] This has not been supported by any other author, and both Rastrimonadida and Rastrimonas are omitted from current classifications for lacking molecular data. [12] Similarly, the genus Acrocoelus, assigned directly to the order Acrocoelida without a family, [17] is also excluded due to the absence of molecular data. [18] The genus Maranthos, although genetically sequenced, is not assigned to any family or order. [19] The remaining groups, Perkinsidae and Xcellidae, are only sometimes assigned to order Perkinsida, [20] [21] while in other instances their parent taxon is directly Perkinsea. [6] [22] Taxonomic ranks (i.e. families, orders, classes...) are mostly omitted in favour of using only clades. [18] Shown below is the commonly accepted scheme, omitting order-level taxa:

Simplified cladogram of Perkinsea based on 2021-2023 phylogenetic analyses. [19] [5] [20] Environmental DNA clades are omitted, with the exception of clade 'NAG01' which groups possible infectious agents of tadpoles. [5]

As mentioned above, two genera have uncertain placement because they have never been genetically sequenced, but they have been assigned to Perkinsea on the basis of their morphology: [13]

References

  1. ^ a b c d Norman D. Levine (1978). "Perkinsus gen. n. and Other New Taxa in the Protozoan Phylum Apicomplexa". The Journal of Parasitology. 64 (3): 549. doi: 10.2307/3279807. JSTOR  3279807.
  2. ^ a b c d Norén, Fredrik; Moestrup, Øjvind; Rehnstam-Holm, Ann-Sofi (October 1999). "Parvilucifera infectans Norén et Moestrup gen. et sp. nov. (Perkinsozoa phylum nov.): a parasitic flagellate capable of killing toxic microalgae". European Journal of Protistology. 35 (3): 233–254. doi: 10.1016/S0932-4739(99)80001-7.
  3. ^ Agostina V. Marano; Carmen L.A. Pires-Zottarelli; José I. de Souza; Sally L. Glocking; Eduardo Leaño; Claire M.M. Gachon; Martina Strittmatter; Frank H. Gleason (2012). "Chapter 11: Hyphochytriomycota, Oomycota and Perkinsozoa (Super-group Chromalveolata)". In E.B. Gareth Jones; Ka-Lai Pang (eds.). Marine Fungi and Fungal-like Organisms. Göttingen: De Gruyter. pp. 167–214. doi: 10.1515/9783110264067.167. ISBN  978-3-11-026406-7.
  4. ^ a b c Albert Reñé; Elisabet Alacid; Isabel Ferrera; Esther Garcés (24 August 2017). "Evolutionary Trends of Perkinsozoa (Alveolata) Characters Based on Observations of Two New Genera of Parasitoids of dinoflagellates, Dinovorax gen. nov. and Snorkelia gen. nov". Frontiers in Microbiology. 8: 1594. doi: 10.3389/FMICB.2017.01594. ISSN  1664-302X. PMC  5609580. PMID  28970818. Wikidata  Q42163896.{{ cite journal}}: CS1 maint: unflagged free DOI ( link)
  5. ^ a b c d e f Boo Seong Jeon; Myung Gil Park (29 November 2021). "A Novel Parasitoid of Marine Dinoflagellates, Pararosarium dinoexitiosum gen. et sp. nov. (Perkinsozoa, Alveolata), Showing Characteristic Beaded Sporocytes". Frontiers in Microbiology. 12: 748092. doi: 10.3389/FMICB.2021.748092. ISSN  1664-302X. PMC  8667275. PMID  34912310. Wikidata  Q112637999.{{ cite journal}}: CS1 maint: unflagged free DOI ( link)
  6. ^ a b c d Mark A Freeman; Janina Fuss; Árni Kristmundsson; et al. (13 May 2017). "X-Cells Are Globally Distributed, Genetically Divergent Fish Parasites Related to Perkinsids and Dinoflagellates". Current Biology. 27 (11): 1645-1651.e3. doi: 10.1016/J.CUB.2017.04.045. ISSN  0960-9822. PMID  28528902. Wikidata  Q36377210.
  7. ^ Villalba, A.; et al. (2004). "Perkinsosis in molluscs: a review" (PDF). Aquatic Living Resources. 17 (4): 411–32. doi: 10.1051/alr:2004050.
  8. ^ a b Isabel Fernández; Fernando Pardos; Jesús Benito; Nina Larissa Arroyo (1999). "Acrocoelus glossobalani gen. nov. et sp. nov., a protistan flagellate from the gut of the enteropneust Glossabalanus minutus". European Journal of Protistology. 35 (1): 55–65. doi: 10.1016/S0932-4739(99)80022-4.
  9. ^ Mangot, Jean-François; Debroas, Didier; Domaizon, Isabelle (16 May 2010). "Perkinsozoa, a well-known marine protozoan flagellate parasite group, newly identified in lacustrine systems: a review". Hydrobiologia. 659 (1): 37–48. doi: 10.1007/s10750-010-0268-x. S2CID  36522615.
  10. ^ Norman D. Levine (1988). The Protozoan Phylum Apicomplexa. Vol. 1 (1 ed.). CRC Press. ISBN  9781315897004.
  11. ^ C. Louise Goggin; Stephen C. Barker (1993). "Phylogenetic position of the genus Perkinsus (Protista, Apicomplexa) based on small subunit ribosomal RNA". Molecular and Biochemical Parasitology. 60 (1): 65–70. doi: 10.1016/0166-6851(93)90029-w. PMID  8366895.
  12. ^ a b Sarah Itoïz; Sebastian Metz; Evelyne Derelle; Albert Reñé; Esther Garcés; David Bass; Philippe Soudant; Aurélie Chambouvet (1 January 2021). "Emerging Parasitic Protists: The Case of Perkinsea". Frontiers in Microbiology. 12: 735815. doi: 10.3389/FMICB.2021.735815. ISSN  1664-302X. PMC  8792838. PMID  35095782. Wikidata  Q111321231.{{ cite journal}}: CS1 maint: unflagged free DOI ( link)
  13. ^ a b Thomas Cavalier-Smith (30 July 2014). "Gregarine site-heterogeneous 18S rDNA trees, revision of gregarine higher classification, and the evolutionary diversification of Sporozoa". European Journal of Protistology. 50 (5): 472–495. doi: 10.1016/J.EJOP.2014.07.002. ISSN  0932-4739. PMID  25238406. Wikidata  Q39198055.
  14. ^ a b c Corey C. Holt; Elisabeth Hehenberger; Denis V. Tikhonenkov; Victoria K. L. Jacko-Reynolds; Noriko Okamoto; Elizabeth C. Cooney; Nicholas A. T. Irwin; Patrick J. Keeling (3 November 2023). "Multiple parallel origins of parasitic Marine Alveolates". Nature Communications. 14 (1): 7049. doi: 10.1038/S41467-023-42807-0. ISSN  2041-1723. PMC  10624901. PMID  37923716. Wikidata  Q125317501.
  15. ^ a b c Varsha Mathur; Eric D. Salomaki; Kevin C. Wakeman; Ina Na; Waldan K. Kwong; Martin Kolísko; Patrick John Keeling (4 January 2023). "Reconstruction of Plastid Proteomes of Apicomplexans and Close Relatives Reveals the Major Evolutionary Outcomes of Cryptic Plastids". Molecular Biology and Evolution. 40 (1): msad002. doi: 10.1093/MOLBEV/MSAD002. ISSN  0737-4038. PMC  9847631. PMID  36610734. Wikidata  Q124684358.
  16. ^ Thomas Cavalier-Smith (5 September 2017). "Kingdom Chromista and its eight phyla: a new synthesis emphasising periplastid protein targeting, cytoskeletal and periplastid evolution, and ancient divergences". Protoplasma. 255 (1): 297–357. doi: 10.1007/S00709-017-1147-3. ISSN  0033-183X. PMC  5756292. PMID  28875267. Wikidata  Q47194626.
  17. ^ a b T. Cavalier-Smith; E.E. Chao (September 2004). "Protalveolate phylogeny and systematics and the origins of Sporozoa and dinoflagellates (phylum Myzozoa nom. nov.)". European Journal of Protistology. 40 (3): 185–212. doi: 10.1016/J.EJOP.2004.01.002. ISSN  0932-4739. Wikidata  Q54540793.
  18. ^ a b Sina M. Adl; David Bass; Christopher E. Lane; et al. (1 January 2019). "Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes". Journal of Eukaryotic Microbiology. 66 (1): 4–119. doi: 10.1111/JEU.12691. ISSN  1066-5234. PMC  6492006. PMID  30257078. Wikidata  Q57086550.
  19. ^ a b c Albert Reñé; Elisabet Alacid; Rachele Gallisai; Aurelie Chambouvet; Alan D Fernández-Valero; Esther Garcés (5 August 2021). "New Perkinsea Parasitoids of Dinoflagellates Distantly Related to Parviluciferaceae Members". Frontiers in Microbiology. 12: 701196. doi: 10.3389/FMICB.2021.701196. ISSN  1664-302X. PMC  8375308. PMID  34421856. Wikidata  Q112639124.{{ cite journal}}: CS1 maint: unflagged free DOI ( link)
  20. ^ a b c Clive W. Evans; Selina Patel; Nicholas J. Matzke; Craig D. Millar (28 April 2023). "Cryoxcellia borchgrevinki gen. nov., sp. nov., a new parasitic X‑cell species in an Antarctic nototheniid fish, the bald notothen Trematomus borchgrevinki". Polar Biology. 46: 513–521. doi: 10.1007/S00300-023-03132-W. ISSN  0722-4060. Wikidata  Q124515389.
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  23. ^ Boo Seong Jeon; Myung Gil Park (21 December 2018). "Tuberlatum coatsi gen. n., sp. n. (Alveolata, Perkinsozoa), a New Parasitoid with Short Germ Tubes Infecting Marine Dinoflagellates". Protist. 170 (1): 82–103. doi: 10.1016/J.PROTIS.2018.12.003. ISSN  1434-4610. PMID  30797136. Wikidata  Q91851560.
  24. ^ Brugerolle, G. (2003). "Apicomplexan parasite Cryptophagus renamed Rastrimonas gen. nov". European Journey of Protistology. 39 (1): 101. doi: 10.1078/0932-4739-00910.